Escherichia coli str. BE104

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain BE104 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, which is a common feature among many members of the Enterobacteriaceae family. E. coli BE104 optimally grows at a temperature of 37.0°C, aligning with the physiological conditions often found in warm-blooded hosts, where it is predominantly associated. As a host-associated microbe, E. coli BE104 likely plays a role in the complex microbial ecosystems of its host, contributing to various metabolic processes. Its ability to adapt to fluctuating oxygen levels suggests potential versatility in metabolic pathways, which may facilitate its survival in diverse microhabitats within the host. This adaptability could also imply a role in nutrient cycling or competition with other microorganisms, although specific interactions remain to be elucidated. Overall, the traits of E. coli strain BE104 highlight its potential significance within host-associated microbiomes, where its facultative anaerobic capabilities may influence community dynamics and host health. Further exploration of this strain's functional roles could provide insights into its contributions to microbial ecology and host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. BE104
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. BE104

Accession NumberNZ_CP040643.1

Gene Summary

Adenine Count

1176476 bp

Thymine Count

1174817 bp

Guanine Count

1212144 bp

Cytosine Count

1211685 bp

Genome Length

4775122 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

324 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
xanthine dehydrogenase molybdenum-binding subunit xdhaFGC38_RS15515Not Available+3133195 - 313549282663.0
xanthine dehydrogenase fad-binding subunit xdhbFGC38_RS15520Not Available+3135503 - 313638131558.6
xanthine dehydrogenase iron sulfur-binding subunit xdhcFGC38_RS15525Not Available+3136378 - 313685716922.7
sigma-54 interaction domain-containing proteinFGC38_RS15530Not Available-3136897 - 313867566100.0
knotted carbamoyltransferase ygewFGC38_RS15535Not Available+3139154 - 314034144058.7
diaminopropionate ammonia-lyaseFGC38_RS15540Not Available+3140399 - 314159543330.1
ygey family selenium metabolism-linked hydrolaseFGC38_RS15545Not Available+3141653 - 314286444806.4
d-phenylhydantoinaseFGC38_RS15550Not Available+3142917 - 314430251028.1
carbamate kinaseFGC38_RS15555Not Available+3144350 - 314528233072.9
selenium-dependent molybdenum cofactor biosynthesis protein yqebFGC38_RS15560Not Available-3145503 - 314712857685.4

Displaying genes 3121 – 3130 of 4701 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites