Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase molybdenum-binding subunit xdha | FGC38_RS15515 | Not Available | + | 3133195 - 3135492 | 82663.0 |
| xanthine dehydrogenase fad-binding subunit xdhb | FGC38_RS15520 | Not Available | + | 3135503 - 3136381 | 31558.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | FGC38_RS15525 | Not Available | + | 3136378 - 3136857 | 16922.7 |
| sigma-54 interaction domain-containing protein | FGC38_RS15530 | Not Available | - | 3136897 - 3138675 | 66100.0 |
| knotted carbamoyltransferase ygew | FGC38_RS15535 | Not Available | + | 3139154 - 3140341 | 44058.7 |
| diaminopropionate ammonia-lyase | FGC38_RS15540 | Not Available | + | 3140399 - 3141595 | 43330.1 |
| ygey family selenium metabolism-linked hydrolase | FGC38_RS15545 | Not Available | + | 3141653 - 3142864 | 44806.4 |
| d-phenylhydantoinase | FGC38_RS15550 | Not Available | + | 3142917 - 3144302 | 51028.1 |
| carbamate kinase | FGC38_RS15555 | Not Available | + | 3144350 - 3145282 | 33072.9 |
| selenium-dependent molybdenum cofactor biosynthesis protein yqeb | FGC38_RS15560 | Not Available | - | 3145503 - 3147128 | 57685.4 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism