Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | FGC38_RS14815 | Not Available | + | 2983689 - 2984810 | 41365.7 |
| hydrogenase maturation carbamoyl dehydratase hype | FGC38_RS14820 | Not Available | + | 2984807 - 2985817 | 35094.6 |
| formate hydrogenlyase transcriptional activator flha | FGC38_RS14825 | Not Available | + | 2985891 - 2987969 | 78472.5 |
| nitrous oxide-stimulated promoter family protein | FGC38_RS14830 | Not Available | - | 2988006 - 2988359 | 13941.2 |
| hypothetical protein | FGC38_RS23415 | Not Available | - | 2988436 - 2988570 | 4890.38 |
| dna mismatch repair protein muts | FGC38_RS14835 | Not Available | + | 2988646 - 2991207 | 95252.5 |
| protein-serine/threonine phosphatase | FGC38_RS14840 | Not Available | + | 2991313 - 2991969 | 25099.6 |
| dna-binding transcriptional repressor ygbi | FGC38_RS14845 | Not Available | - | 2992020 - 2992787 | 27436.3 |
| l-threonate dehydrogenase | FGC38_RS14850 | Not Available | + | 2992983 - 2993891 | 30753.0 |
| 3-oxo-tetronate kinase | FGC38_RS14855 | Not Available | + | 2993888 - 2995054 | 41341.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism