Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | FGC38_RS14255 | Not Available | + | 2879515 - 2880306 | 29263.9 |
| hlyc/corc family transporter | FGC38_RS14260 | Not Available | + | 2880327 - 2881613 | 48047.2 |
| nucleotide exchange factor grpe | FGC38_RS14265 | Not Available | - | 2881668 - 2882261 | 21799.1 |
| nad(+) kinase | FGC38_RS14270 | Not Available | + | 2882384 - 2883262 | 32568.3 |
| dna repair protein recn | FGC38_RS14275 | Not Available | + | 2883348 - 2885009 | 61400.1 |
| outer membrane protein assembly factor bame | FGC38_RS14280 | Not Available | + | 2885158 - 2885499 | 12302.8 |
| rnfh family protein | FGC38_RS14285 | Not Available | - | 2885561 - 2885851 | 10790.0 |
| type ii toxin-antitoxin system toxin rata | FGC38_RS14290 | Not Available | - | 2885841 - 2886278 | 16220.6 |
| ssra-binding protein smpb | FGC38_RS14295 | Not Available | + | 2886449 - 2886931 | 18270.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | + | 2887146 - 2887508 | Not Available |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism