Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | FGC38_RS14105 | Not Available | + | 2848308 - 2848997 | 25694.7 |
| trna/rrna methyltransferase | FGC38_RS14110 | Not Available | - | 2849045 - 2850082 | 37786.5 |
| thioredoxin trxc | FGC38_RS14115 | Not Available | + | 2850289 - 2850708 | 15555.6 |
| pp_02774 | FGC38_RS14120 | Not Available | + | 2850777 - 2851475 | Not Available |
| peptidyl-lysine n-acetyltransferase patz | FGC38_RS14125 | Not Available | + | 2851507 - 2854167 | 97993.2 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | FGC38_RS14130 | Not Available | + | 2854281 - 2855636 | 52804.8 |
| yfim family lipoprotein | FGC38_RS14135 | Not Available | + | 2855682 - 2856005 | 11805.9 |
| alpha-ketoglutarate permease | FGC38_RS14140 | Not Available | - | 2856002 - 2857300 | 47055.3 |
| 5s ribosomal rna | Not Available | Not Available | + | 2857625 - 2857740 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 2857835 - 2860737 | Not Available |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism