Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor regulatory protein rseb | FGC38_RS14055 | Not Available | - | 2839352 - 2840308 | 35751.8 |
| anti-sigma-e factor rsea | FGC38_RS14060 | Not Available | - | 2840308 - 2840958 | 24322.8 |
| rna polymerase sigma factor rpoe | FGC38_RS14065 | Not Available | - | 2840991 - 2841566 | 21697.0 |
| rpoe leader peptide rsed | FGC38_RS14070 | Not Available | - | 2841563 - 2841718 | 6229.83 |
| l-aspartate oxidase | FGC38_RS14075 | Not Available | + | 2841974 - 2843596 | 60340.9 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | FGC38_RS14080 | Not Available | - | 2843581 - 2844318 | 27271.4 |
| atp-dependent rna helicase srmb | FGC38_RS14085 | Not Available | + | 2844450 - 2845784 | 49917.0 |
| lysr family transcriptional regulator | FGC38_RS14090 | Not Available | - | 2845993 - 2846874 | 33245.2 |
| cysteine/o-acetylserine transporter | FGC38_RS14095 | Not Available | + | 2846977 - 2847564 | 21249.5 |
| autonomous glycyl radical cofactor grca | FGC38_RS14100 | Not Available | - | 2847620 - 2848003 | 14285.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism