Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| periplasmic nitrate reductase subunit alpha | FGC38_RS12190 | Not Available | - | 2431821 - 2434307 | 93047.0 |
| chaperone napd | FGC38_RS12195 | Not Available | - | 2434304 - 2434567 | 9469.03 |
| ferredoxin-type protein napf | FGC38_RS12200 | Not Available | - | 2434557 - 2435051 | 18048.3 |
| protein yojo | FGC38_RS23390 | Not Available | + | 2435160 - 2435324 | 6218.66 |
| serine protease inhibitor ecotin | FGC38_RS12205 | Not Available | + | 2435438 - 2435947 | 19053.1 |
| malate dehydrogenase (quinone) | FGC38_RS12210 | Not Available | - | 2436662 - 2438308 | 60233.0 |
| microcin j25 efflux abc transporter yoji | FGC38_RS12215 | Not Available | - | 2438526 - 2440169 | 61556.4 |
| dna oxidative demethylase alkb | FGC38_RS12220 | Not Available | - | 2440245 - 2440895 | 24076.8 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | FGC38_RS12225 | Not Available | - | 2440895 - 2441959 | 39326.0 |
| fad:protein fmn transferase apbe | FGC38_RS12230 | Not Available | - | 2442033 - 2443088 | 38551.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism