Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murein dd-endopeptidase mepm | FGC38_RS10415 | Not Available | - | 2073550 - 2074872 | 49060.6 |
| zinc abc transporter substrate-binding protein znua | FGC38_RS10420 | Not Available | - | 2074888 - 2075820 | 33779.2 |
| zinc abc transporter atp-binding protein znuc | FGC38_RS10425 | Not Available | + | 2075899 - 2076654 | 27869.3 |
| zinc abc transporter permease subunit znub | FGC38_RS10430 | Not Available | + | 2076651 - 2077436 | 27730.4 |
| holliday junction branch migration dna helicase ruvb | FGC38_RS10435 | Not Available | - | 2077583 - 2078593 | 37176.0 |
| holliday junction branch migration protein ruva | FGC38_RS10440 | Not Available | - | 2078602 - 2079213 | 22087.0 |
| stress response small protein yobi | FGC38_RS10445 | Not Available | - | 2079352 - 2079417 | 2665.42 |
| yebb family permuted papain-like enzyme | FGC38_RS10450 | Not Available | + | 2079488 - 2080090 | 22705.2 |
| crossover junction endodeoxyribonuclease ruvc | FGC38_RS10455 | Not Available | - | 2080092 - 2080613 | 18747.9 |
| yebc/pmpr family dna-binding transcriptional regulator | FGC38_RS10460 | Not Available | - | 2080648 - 2081388 | 26424.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism