Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| autoinducer-2 kinase | FGC38_RS08620 | Not Available | - | 1732581 - 1734173 | 57548.0 |
| transcriptional regulator lsrr | FGC38_RS08625 | Not Available | - | 1734252 - 1735205 | 33799.0 |
| autoinducer 2 abc transporter atp-binding protein lsra | FGC38_RS08630 | Not Available | + | 1735454 - 1736989 | 55824.8 |
| autoinducer 2 abc transporter permease lsrc | FGC38_RS08635 | Not Available | + | 1736983 - 1738011 | 36397.1 |
| autoinducer 2 abc transporter permease lsrd | FGC38_RS08640 | Not Available | + | 1738011 - 1739003 | 34458.6 |
| autoinducer 2 abc transporter substrate-binding protein lsrb | FGC38_RS08645 | Not Available | + | 1739015 - 1740037 | 36686.9 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase | FGC38_RS08650 | Not Available | + | 1740064 - 1740939 | 31894.6 |
| (4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase | FGC38_RS08655 | Not Available | + | 1740963 - 1741253 | 11255.4 |
| trans-aconitate 2-methyltransferase | FGC38_RS08660 | Not Available | + | 1741310 - 1742068 | 29007.5 |
| bestrophin family protein | FGC38_RS08665 | Not Available | - | 1742072 - 1742986 | 34811.0 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism