Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2/dual specificity phosphatase family protein | FGC38_RS08110 | Not Available | + | 1614849 - 1616165 | 50547.6 |
| fmn-dependent nadh-azoreductase | FGC38_RS08115 | Not Available | - | 1616219 - 1616824 | 21658.9 |
| atp-dependent rna helicase hrpa | FGC38_RS08120 | Not Available | + | 1617025 - 1620927 | 149036.0 |
| duf218 domain-containing protein ydcf | FGC38_RS08125 | Not Available | + | 1621199 - 1621999 | 29707.4 |
| aldehyde dehydrogenase | FGC38_RS08130 | Not Available | + | 1622196 - 1623635 | 52275.8 |
| hypothetical protein | FGC38_RS08135 | Not Available | - | 1623677 - 1624677 | 35326.0 |
| cytochrome b561 | FGC38_RS08140 | Not Available | + | 1624866 - 1625396 | 20287.7 |
| periplasmic protein | FGC38_RS08145 | Not Available | + | 1625641 - 1625814 | 5860.19 |
| protein yncp | FGC38_RS23510 | Not Available | + | 1625840 - 1625908 | 2400.13 |
| type i toxin-antitoxin system toxin hokb | FGC38_RS08150 | Not Available | - | 1625886 - 1626035 | 5626.16 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism