Escherichia coli str. BE104

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain BE104 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, which is a common feature among many members of the Enterobacteriaceae family. E. coli BE104 optimally grows at a temperature of 37.0°C, aligning with the physiological conditions often found in warm-blooded hosts, where it is predominantly associated. As a host-associated microbe, E. coli BE104 likely plays a role in the complex microbial ecosystems of its host, contributing to various metabolic processes. Its ability to adapt to fluctuating oxygen levels suggests potential versatility in metabolic pathways, which may facilitate its survival in diverse microhabitats within the host. This adaptability could also imply a role in nutrient cycling or competition with other microorganisms, although specific interactions remain to be elucidated. Overall, the traits of E. coli strain BE104 highlight its potential significance within host-associated microbiomes, where its facultative anaerobic capabilities may influence community dynamics and host health. Further exploration of this strain's functional roles could provide insights into its contributions to microbial ecology and host-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. BE104
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. BE104

Accession NumberNZ_CP040643.1

Gene Summary

Adenine Count

1176476 bp

Thymine Count

1174817 bp

Guanine Count

1212144 bp

Cytosine Count

1211685 bp

Genome Length

4775122 bp

Protein-coding Genes

4377 genes

Non-Coding Genes

324 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
1,2-phenylacetyl-coa epoxidase subunit paadFGC38_RS08000Not Available+1589889 - 159038618325.1
1,2-phenylacetyl-coa epoxidase subunit paaeFGC38_RS08005Not Available+1590394 - 159146439322.2
2,3-dehydroadipyl-coa hydratase paafFGC38_RS08010Not Available+1591461 - 159222827239.0
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paagFGC38_RS08015Not Available+1592228 - 159301628406.3
3-hydroxyacyl-coa dehydrogenase paahFGC38_RS08020Not Available+1593018 - 159444551735.6
hydroxyphenylacetyl-coa thioesterase paaiFGC38_RS08025Not Available+1594435 - 159485714851.6
bifunctional 3-oxoadipyl-coa/3-oxo-5,6-dehydrosuberyl-coa thiolaseFGC38_RS08030Not Available+1594857 - 159606242279.2
phenylacetate--coa ligase paakFGC38_RS08035Not Available+1596089 - 159740248955.8
phenylacetic acid degradation operon negative regulatory protein paaxFGC38_RS08040Not Available+1597503 - 159845335296.7
phenylacetic acid degradation protein paayFGC38_RS08045Not Available+1598435 - 159902521325.9

Displaying genes 1691 – 1700 of 4701 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites