Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapa | FGC38_RS07405 | Not Available | + | 1474207 - 1474515 | 11352.1 |
| lipopolysaccharide assembly protein lapb | FGC38_RS07410 | Not Available | + | 1474522 - 1475691 | 44533.6 |
| orotidine-5'-phosphate decarboxylase | FGC38_RS07415 | Not Available | + | 1475885 - 1476622 | 26351.8 |
| stress response translation initiation inhibitor ycih | FGC38_RS07420 | Not Available | + | 1476622 - 1476948 | 11396.9 |
| osmotically-inducible lipoprotein osmb | FGC38_RS07425 | Not Available | - | 1477074 - 1477292 | 6948.51 |
| dna-binding transcriptional regulator ycit | FGC38_RS07430 | Not Available | - | 1477561 - 1478310 | 27604.2 |
| protein yciz | FGC38_RS07435 | Not Available | - | 1478400 - 1478573 | 6441.71 |
| protein ymid | FGC38_RS23500 | Not Available | + | 1478611 - 1478739 | 4937.05 |
| cyclic di-gmp phosphodiesterase | FGC38_RS07440 | Not Available | - | 1478721 - 1480706 | 74669.2 |
| hypothetical protein | FGC38_RS07445 | Not Available | + | 1480760 - 1480864 | 4122.21 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism