Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli str. BE104
Accession NumberNZ_CP040643.1
Gene Summary
Adenine Count
1176476 bp
Thymine Count
1174817 bp
Guanine Count
1212144 bp
Cytosine Count
1211685 bp
Genome Length
4775122 bp
Protein-coding Genes
4377 genes
Non-Coding Genes
324 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 1 small subunit | FGC38_RS05770 | Not Available | + | 1167304 - 1168422 | 40683.6 |
| ni/fe-hydrogenase large subunit | FGC38_RS05775 | Not Available | + | 1168419 - 1170212 | 66257.0 |
| ni/fe-hydrogenase b-type cytochrome subunit | FGC38_RS05780 | Not Available | + | 1170231 - 1170938 | 27598.8 |
| hydrogenase 1 maturation protease | FGC38_RS05785 | Not Available | + | 1170935 - 1171522 | 21547.7 |
| hydrogenase-1 operon protein hyae | FGC38_RS05790 | Not Available | + | 1171519 - 1171917 | 14890.6 |
| hydrogenase expression/formation protein | FGC38_RS05795 | Not Available | + | 1171914 - 1172771 | 31432.5 |
| cytochrome bd-ii oxidase subunit 1 | FGC38_RS05800 | Not Available | + | 1172905 - 1174449 | 57923.2 |
| cytochrome d ubiquinol oxidase subunit ii | FGC38_RS05805 | Not Available | + | 1174461 - 1175597 | 42426.3 |
| cytochrome bd-ii oxidase subunit cbdx | FGC38_RS05810 | Not Available | + | 1175610 - 1175702 | 3597.68 |
| bifunctional acid phosphatase/4-phytase | FGC38_RS05815 | Not Available | + | 1175782 - 1177080 | 47059.5 |
Pathways
12367 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism