Escherichia coli str. 51008369SK1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli str. 51008369SK1 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as singles. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments, which is a common characteristic among many E. coli strains. The optimal growth temperature for E. coli str. 51008369SK1 is approximately 37.0°C, aligning with the typical human body temperature and suggesting its adaptation to a host-associated habitat. This strain's habitat is specifically noted as host-associated, which implies a potential relationship with the gastrointestinal tract of mammals, where E. coli is predominantly found. The facultative anaerobic nature of this bacterium allows it to utilize various metabolic pathways depending on the availability of oxygen, contributing to its versatility in diverse environments within the host. The ability of E. coli str. 51008369SK1 to exist in both aerobic and anaerobic conditions may facilitate its survival and colonization in the dynamic microenvironments of the host's intestinal flora. Understanding the traits of this particular strain can provide insights into its potential roles within the microbiome, including nutrient cycling and interactions with other microbial communities, underscoring the complexity of host-associated bacterial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. 51008369SK1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli str. 51008369SK1

Accession NumberNZ_CP029974.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

93 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinDNQ41_RS25160Not Available-47551 - 4803618586.7
conjugal transfer mating-pair stabilization protein tragDNQ41_RS25165Not Available-48052 - 50874102967.0
conjugal transfer pilus assembly protein trahDNQ41_RS25170Not Available-50871 - 5224450236.3
f-type conjugal transfer protein trbfDNQ41_RS25175Not Available-52231 - 5262315698.1
p-type conjugative transfer protein trbjDNQ41_RS25180Not Available-52604 - 5295112944.0
type-f conjugative transfer system pilin assembly thiol-disulfide isomerase trbbDNQ41_RS25185Not Available-52881 - 5342620061.3
type-f conjugative transfer system pilin chaperone traqDNQ41_RS25190Not Available-53413 - 5369710830.3
conjugal transfer protein trbaDNQ41_RS25195Not Available-53816 - 5416012570.8
type-f conjugative transfer system pilin assembly protein trafDNQ41_RS25200Not Available-54174 - 5491727976.6
conjugal transfer protein trbeDNQ41_RS25205Not Available-54910 - 551679692.78

Displaying genes 61 – 70 of 93 in total

Pathways

12367 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites