Citrobacter freundii str. c196

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii strain c196 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism. This strain is nonsporulating and has been identified in a variety of environments, including hospital sewage, the intestinal tract, general sewage, soil, and surface waters. Its presence in diverse habitats suggests a versatile ecological role, allowing it to adapt to both anaerobic and aerobic conditions. The ability to thrive in hospital sewage indicates a potential association with human activity, while its isolation from natural environments such as soil and surface waters highlights its adaptability and resilience. The varied habitats of C. freundii str. c196 may reflect its role in nutrient cycling and organic matter decomposition within these ecosystems. Its adaptable nature may enable it to respond to environmental changes, potentially influencing microbial community dynamics in both clinical and natural settings. This strain's capacity to inhabit both anthropogenic and natural environments underscores its significance in understanding microbial ecology and the impacts of human waste on microbial populations in the environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Citrobacter freundii str. c196
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii str. c196

Accession NumberNEEZ00000000.1

Gene Summary

Adenine Count

1416802 bp

Thymine Count

1409964 bp

Guanine Count

1501215 bp

Cytosine Count

1514219 bp

Genome Length

5842230 bp

Protein-coding Genes

5411 genes

Non-Coding Genes

392 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
3-phosphoshikimate 1-carboxyvinyltransferaseB9P90_03210Not Available-651067 - 65235045973.2
phosphoserine transaminaseB9P90_03215Not Available-652420 - 65350839721.4
duf421 domain-containing proteinB9P90_03220Not Available-653721 - 65441326046.2
30s ribosomal protein s12 methylthiotransferase accessory protein ycaoB9P90_03225Not Available+654550 - 65631065560.0
formate transporter focaB9P90_03230Not Available+656673 - 65757232541.5
formate acetyltransferaseB9P90_03235Not Available+657632 - 65991485014.4
pyruvate formate lyase-activating proteinB9P90_03240Not Available+660100 - 66084028280.9
amino acid permeaseB9P90_03245Not Available-660884 - 66230552284.4
mfs transporterB9P90_03250Not Available-662519 - 66366741525.4
hydrolaseB9P90_03255Not Available+664053 - 66467923075.5

Displaying genes 991 – 1000 of 5803 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites