Eikenella corrodens

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens is a gram-negative, rod-shaped bacterium that thrives at human body temperature, categorizing it as a mesophile. This microbe is a heterotroph, relying on organic compounds for nutrition, and is classified as a facultative anaerobe, able to grow in both aerobic and anaerobic environments. Eikenella corrodens is part of the normal flora of humans, colonizing various body sites, including the mouth, gastrointestinal tract, and female genital tract, where it plays a role in maintaining microbial balance. The gram-negative nature of Eikenella corrodens indicates that it has a thin peptidoglycan layer and is surrounded by an outer membrane containing lipopolysaccharides, which can contribute to its pathogenic potential. This bacterium's rod-shaped morphology allows it to adapt well to its environments, whether within the biofilms of oral cavities or in deeper tissue infections. As a mesophilic organism, it prefers temperatures around 37°C, which aligns perfectly with the human body temperature, providing ideal conditions for growth. Being a facultative anaerobe, Eikenella corrodens can utilize oxygen when available but also has the flexibility to grow in its absence, showcasing its versatility. Its heterotrophic nature means it metabolizes organic matter, often from the host, contributing to both its symbiotic and pathogenic relationships. Eikenella corrodens is associated with human bite wounds and dental infections, and it can cause serious infections in immunocompromised individuals. Remarkably, it has been recognized for its role in periodontitis and endocarditis, highlighting its significance in both oral health and systemic infections. Interestingly, despite its pathogenic potential, Eikenella corrodens has been noted for its susceptibility to many antibiotics, allowing for effective treatment options in cases of infection.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal; genital tracts; intestinal; oral cavity; oropharyngeal; oropharynx; respiratory; upper respiratory tract; urogenital tract
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens

Accession NumberLXSF00000000.1

Gene Summary

Adenine Count

495696 bp

Thymine Count

475387 bp

Guanine Count

596371 bp

Cytosine Count

635594 bp

Genome Length

2203048 bp

Protein-coding Genes

2012 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative ci repressorA7P89_01165Not Available-251472 - 25222728197.8
Gp43A7P89_01170Not Available+252781 - 25326017960.5
Phage transposaseA7P89_01175Not Available+253253 - 25528076113.2
Phage transposaseA7P89_01180Not Available+255347 - 25623732852.0
hypothetical proteinA7P89_01185Not Available+256408 - 25670110936.0
Hypothetical proteinA7P89_01190Not Available+256844 - 25737420081.1
Hypothetical proteinA7P89_01195Not Available+257376 - 25805925402.7
hypothetical proteinA7P89_01200Not Available+258071 - 25838812179.2
Hypothetical proteinA7P89_01205Not Available+258385 - 25890018255.9
hypothetical proteinA7P89_01210Not Available+258881 - 25927014915.5

Displaying genes 1 – 10 of 4531 in total

Pathways

20 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

197 records
Metabolite IDMetabolite nameStructureCAS number
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm00019783-(4-hydroxyphenyl)pyruvateC9H7O4Chemical structure of 3-(4-hydroxyphenyl)pyruvateNot available
Average179.1495Da
Monoisotopic179.034433712Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002655octadecanoyl-CoAC39H66N7O17P3SChemical structure of octadecanoyl-CoANot available
Average1029.97Da
Monoisotopic1029.347070181Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da

Displaying 21–30 of 197 metabolites