Eikenella corrodens

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens is a gram-negative, rod-shaped bacterium that thrives at human body temperature, categorizing it as a mesophile. This microbe is a heterotroph, relying on organic compounds for nutrition, and is classified as a facultative anaerobe, able to grow in both aerobic and anaerobic environments. Eikenella corrodens is part of the normal flora of humans, colonizing various body sites, including the mouth, gastrointestinal tract, and female genital tract, where it plays a role in maintaining microbial balance. The gram-negative nature of Eikenella corrodens indicates that it has a thin peptidoglycan layer and is surrounded by an outer membrane containing lipopolysaccharides, which can contribute to its pathogenic potential. This bacterium's rod-shaped morphology allows it to adapt well to its environments, whether within the biofilms of oral cavities or in deeper tissue infections. As a mesophilic organism, it prefers temperatures around 37°C, which aligns perfectly with the human body temperature, providing ideal conditions for growth. Being a facultative anaerobe, Eikenella corrodens can utilize oxygen when available but also has the flexibility to grow in its absence, showcasing its versatility. Its heterotrophic nature means it metabolizes organic matter, often from the host, contributing to both its symbiotic and pathogenic relationships. Eikenella corrodens is associated with human bite wounds and dental infections, and it can cause serious infections in immunocompromised individuals. Remarkably, it has been recognized for its role in periodontitis and endocarditis, highlighting its significance in both oral health and systemic infections. Interestingly, despite its pathogenic potential, Eikenella corrodens has been noted for its susceptibility to many antibiotics, allowing for effective treatment options in cases of infection.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal; genital tracts; intestinal; oral cavity; oropharyngeal; oropharynx; respiratory; upper respiratory tract; urogenital tract
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens

Accession NumberLXSF00000000.1

Gene Summary

Adenine Count

495696 bp

Thymine Count

475387 bp

Guanine Count

596371 bp

Cytosine Count

635594 bp

Genome Length

2203048 bp

Protein-coding Genes

2012 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative ci repressorA7P89_01165Not Available-251472 - 25222728197.8
Gp43A7P89_01170Not Available+252781 - 25326017960.5
Phage transposaseA7P89_01175Not Available+253253 - 25528076113.2
Phage transposaseA7P89_01180Not Available+255347 - 25623732852.0
hypothetical proteinA7P89_01185Not Available+256408 - 25670110936.0
Hypothetical proteinA7P89_01190Not Available+256844 - 25737420081.1
Hypothetical proteinA7P89_01195Not Available+257376 - 25805925402.7
hypothetical proteinA7P89_01200Not Available+258071 - 25838812179.2
Hypothetical proteinA7P89_01205Not Available+258385 - 25890018255.9
hypothetical proteinA7P89_01210Not Available+258881 - 25927014915.5

Displaying genes 1 – 10 of 4531 in total

Pathways

20 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

197 records
Metabolite IDMetabolite nameStructureCAS number
BASm0020166PA(16:1(9Z)/18:1(9Z))C37H69O8PChemical structure of PA(16:1(9Z)/18:1(9Z))NULL
Average672.9127Da
Monoisotopic672.473005696Da
BASm0020169PA(18:0/18:1(9Z))C39H75O8PChemical structure of PA(18:0/18:1(9Z))384833-24-3
Average702.9818Da
Monoisotopic702.519955888Da
BASm0020176PE(14:1(9Z)/16:0)C35H68NO8PChemical structure of PE(14:1(9Z)/16:0)NULL
Average661.8901Da
Monoisotopic661.468254669Da
BASm0020207PS(12:0/16:0)C34H66NO10PChemical structure of PS(12:0/16:0)NULL
Average679.8623Da
Monoisotopic679.442433849Da
BASm0020208PS(12:0/16:1(9Z))C34H64NO10PChemical structure of PS(12:0/16:1(9Z))NULL
Average677.8464Da
Monoisotopic677.426783785Da
BASm0020209PS(14:1(9Z)/16:0)C36H68NO10PChemical structure of PS(14:1(9Z)/16:0)NULL
Average705.8996Da
Monoisotopic705.458083913Da
BASm0030809CDP-DG(14:0/18:1(11Z))C44H79N3O15P2Chemical structure of CDP-DG(14:0/18:1(11Z))NULL
Average952.07Da
Monoisotopic951.498642852Da
BASm0030858CDP-DG(14:1(9Z)/16:0)C42H75N3O15P2Chemical structure of CDP-DG(14:1(9Z)/16:0)NULL
Average924.016Da
Monoisotopic923.467342723Da
BASm0031891LPA(12:0/0:0)C15H31O7PChemical structure of LPA(12:0/0:0)NULL
Average354.38Da
Monoisotopic354.180740336Da
BASm0031892LPA(14:0/0:0)C17H35O7PChemical structure of LPA(14:0/0:0)NULL
Average382.434Da
Monoisotopic382.212040465Da

Displaying 181–190 of 197 metabolites