Eikenella corrodens

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens is a gram-negative, rod-shaped bacterium that thrives at human body temperature, categorizing it as a mesophile. This microbe is a heterotroph, relying on organic compounds for nutrition, and is classified as a facultative anaerobe, able to grow in both aerobic and anaerobic environments. Eikenella corrodens is part of the normal flora of humans, colonizing various body sites, including the mouth, gastrointestinal tract, and female genital tract, where it plays a role in maintaining microbial balance. The gram-negative nature of Eikenella corrodens indicates that it has a thin peptidoglycan layer and is surrounded by an outer membrane containing lipopolysaccharides, which can contribute to its pathogenic potential. This bacterium's rod-shaped morphology allows it to adapt well to its environments, whether within the biofilms of oral cavities or in deeper tissue infections. As a mesophilic organism, it prefers temperatures around 37°C, which aligns perfectly with the human body temperature, providing ideal conditions for growth. Being a facultative anaerobe, Eikenella corrodens can utilize oxygen when available but also has the flexibility to grow in its absence, showcasing its versatility. Its heterotrophic nature means it metabolizes organic matter, often from the host, contributing to both its symbiotic and pathogenic relationships. Eikenella corrodens is associated with human bite wounds and dental infections, and it can cause serious infections in immunocompromised individuals. Remarkably, it has been recognized for its role in periodontitis and endocarditis, highlighting its significance in both oral health and systemic infections. Interestingly, despite its pathogenic potential, Eikenella corrodens has been noted for its susceptibility to many antibiotics, allowing for effective treatment options in cases of infection.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal; genital tracts; intestinal; oral cavity; oropharyngeal; oropharynx; respiratory; upper respiratory tract; urogenital tract
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens

Accession NumberLXSF00000000.1

Gene Summary

Adenine Count

495696 bp

Thymine Count

475387 bp

Guanine Count

596371 bp

Cytosine Count

635594 bp

Genome Length

2203048 bp

Protein-coding Genes

2012 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative ci repressorA7P89_01165Not Available-251472 - 25222728197.8
Gp43A7P89_01170Not Available+252781 - 25326017960.5
Phage transposaseA7P89_01175Not Available+253253 - 25528076113.2
Phage transposaseA7P89_01180Not Available+255347 - 25623732852.0
hypothetical proteinA7P89_01185Not Available+256408 - 25670110936.0
Hypothetical proteinA7P89_01190Not Available+256844 - 25737420081.1
Hypothetical proteinA7P89_01195Not Available+257376 - 25805925402.7
hypothetical proteinA7P89_01200Not Available+258071 - 25838812179.2
Hypothetical proteinA7P89_01205Not Available+258385 - 25890018255.9
hypothetical proteinA7P89_01210Not Available+258881 - 25927014915.5

Displaying genes 1 – 10 of 4531 in total

Pathways

20 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

197 records
Metabolite IDMetabolite nameStructureCAS number
BASm00189042-Acyl-sn-glycero-3-phosphoglycerol (N-C16:1)C22H42O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C16:1)NULL
Average481.5372Da
Monoisotopic481.256644454Da
BASm00189052-Acyl-sn-glycero-3-phosphoglycerol (N-C18:0)C24H48O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C18:0)NULL
Average511.6063Da
Monoisotopic511.303594646Da
BASm00189062-Acyl-sn-glycero-3-phosphoglycerol (N-C18:1)C24H46O9PChemical structure of 2-Acyl-sn-glycero-3-phosphoglycerol (N-C18:1)NULL
Average509.5904Da
Monoisotopic509.287944582Da
BASm00189092-dodecanoyl-sn-glycerol 3-phosphateC15H31O7PChemical structure of 2-dodecanoyl-sn-glycerol 3-phosphateNULL
Average354.3762Da
Monoisotopic354.180739858Da
BASm00189102-hexadec-9-enoyl-sn-glycerol 3-phosphateC19H37O7PNot availableNULL
Average408.472Da
Monoisotopic408.227690529Da
BASm00189112-hexadecanoyl-sn-glycerol 3-phosphateC19H39O7PNot availableNULL
Average410.488Da
Monoisotopic410.243340594Da
BASm00189122-octadec-11-enoyl-sn-glycerol 3-phosphateC21H41O7PNot availableNULL
Average436.526Da
Monoisotopic436.258990658Da
BASm00189132-octadecanoyl-sn-glycerol 3-phosphateC21H43O7PChemical structure of 2-octadecanoyl-sn-glycerol 3-phosphateNULL
Average438.5357Da
Monoisotopic438.274640242Da
BASm00189142-tetradec-7-enoyl-sn-glycerol 3-phosphateC17H33O7PChemical structure of 2-tetradec-7-enoyl-sn-glycerol 3-phosphateNULL
Average380.4135Da
Monoisotopic380.196389922Da
BASm00189152-tetradecanoyl-sn-glycerol 3-phosphateC17H35O7PChemical structure of 2-tetradecanoyl-sn-glycerol 3-phosphateNULL
Average382.4294Da
Monoisotopic382.212039986Da

Displaying 161–170 of 197 metabolites