Eikenella corrodens

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens is a gram-negative, rod-shaped bacterium that thrives at human body temperature, categorizing it as a mesophile. This microbe is a heterotroph, relying on organic compounds for nutrition, and is classified as a facultative anaerobe, able to grow in both aerobic and anaerobic environments. Eikenella corrodens is part of the normal flora of humans, colonizing various body sites, including the mouth, gastrointestinal tract, and female genital tract, where it plays a role in maintaining microbial balance. The gram-negative nature of Eikenella corrodens indicates that it has a thin peptidoglycan layer and is surrounded by an outer membrane containing lipopolysaccharides, which can contribute to its pathogenic potential. This bacterium's rod-shaped morphology allows it to adapt well to its environments, whether within the biofilms of oral cavities or in deeper tissue infections. As a mesophilic organism, it prefers temperatures around 37°C, which aligns perfectly with the human body temperature, providing ideal conditions for growth. Being a facultative anaerobe, Eikenella corrodens can utilize oxygen when available but also has the flexibility to grow in its absence, showcasing its versatility. Its heterotrophic nature means it metabolizes organic matter, often from the host, contributing to both its symbiotic and pathogenic relationships. Eikenella corrodens is associated with human bite wounds and dental infections, and it can cause serious infections in immunocompromised individuals. Remarkably, it has been recognized for its role in periodontitis and endocarditis, highlighting its significance in both oral health and systemic infections. Interestingly, despite its pathogenic potential, Eikenella corrodens has been noted for its susceptibility to many antibiotics, allowing for effective treatment options in cases of infection.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal; genital tracts; intestinal; oral cavity; oropharyngeal; oropharynx; respiratory; upper respiratory tract; urogenital tract
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens

Accession NumberLXSF00000000.1

Gene Summary

Adenine Count

495696 bp

Thymine Count

475387 bp

Guanine Count

596371 bp

Cytosine Count

635594 bp

Genome Length

2203048 bp

Protein-coding Genes

2012 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative ci repressorA7P89_01165Not Available-251472 - 25222728197.8
Gp43A7P89_01170Not Available+252781 - 25326017960.5
Phage transposaseA7P89_01175Not Available+253253 - 25528076113.2
Phage transposaseA7P89_01180Not Available+255347 - 25623732852.0
hypothetical proteinA7P89_01185Not Available+256408 - 25670110936.0
Hypothetical proteinA7P89_01190Not Available+256844 - 25737420081.1
Hypothetical proteinA7P89_01195Not Available+257376 - 25805925402.7
hypothetical proteinA7P89_01200Not Available+258071 - 25838812179.2
Hypothetical proteinA7P89_01205Not Available+258385 - 25890018255.9
hypothetical proteinA7P89_01210Not Available+258881 - 25927014915.5

Displaying genes 1 – 10 of 4531 in total

Pathways

20 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

197 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001842(5Z,8Z,11Z,14Z)-eicosatetraenoateC20H31O2Chemical structure of (5Z,8Z,11Z,14Z)-eicosatetraenoateNot available
Average303.467Da
Monoisotopic303.2329538Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da

Displaying 11–20 of 197 metabolites