Gluconobacter oxydans

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Gluconobacter

Description

Gluconobacter oxydans is a gram-negative, rod-shaped bacterium that belongs to the family Acetobacteraceae. It has a temperature preference category of Mesophilic, meaning it thrives in moderate temperatures ranging from 20°C to 40°C. As a chemoheterotroph, it derives its energy and organic compounds from the degradation of organic matter in its environment. Gluconobacter oxydans is capable of aerobic respiration, using oxygen as its primary energy source. This is evident in its oxygen preference, classified as an Obligate Aerobe, which means it requires oxygen to survive and grow. In terms of its metabolic properties, G. oxydans is a heterotroph, meaning it cannot produce its own food through photosynthesis or chemosynthesis. Instead, it relies on the breakdown and consumption of organic compounds. Despite this, it is capable of oxidizing carbohydrates, such as glucose, to produce gluconic acid, a key compound in various industrial applications. The bacterium's cell walls are typically Gram-negative, characterized by an outer membrane and a thin peptidoglycan layer. Its rod-shaped morphology allows it to adapt to a variety of environments, from soil to aquatic ecosystems. In terms of its distribution, Gluconobacter oxydans has been isolated from diverse environments, including soil, plants, and water. Its ability to thrive in a range of settings is likely due to its adaptability and ability to exploit a variety of organic matter sources. Gluconobacter oxydans is a significant microbe in the production of gluconic acid, which is used in various applications, including food preservation, pharmaceuticals, and biotechnology. Its ability to produce this valuable compound has led to extensive research into its metabolic pathways and potential industrial applications. As a result, G. oxydans has become a model organism for understanding the mechanisms of bacterial metabolism and developing novel biotechnological strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusGluconobacter
SpeciesGluconobacter oxydans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Gluconobacter oxydans
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gluconobacter oxydans

Accession NumberLHZG00000000.1

Gene Summary

Adenine Count

548241 bp

Thymine Count

551029 bp

Guanine Count

862293 bp

Cytosine Count

857689 bp

Genome Length

2819252 bp

Protein-coding Genes

2539 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+238 - 1726Not Available
hypothetical proteinAD934_00005P76185-1 - 52419021.8
hypothetical proteinAD934_00010Not Available+525 - 110720188.1
transposaseAD934_00015Not Available-1108 - 12144018.94
transposaseAD934_00020P50358-1214 - 166616894.5
hypothetical proteinAD934_00025Not Available+1721 - 207613576.5
integraseAD934_00030Not Available+2346 - 297325026.4
23s ribosomal rnaNot AvailableNot Available+2377 - 5101Not Available
hypothetical proteinAD934_00035Not Available-2993 - 362022581.7
hypothetical proteinAD934_00040Not Available+3661 - 38436334.62

Displaying genes 1 – 10 of 5305 in total

Pathways

23 pathways

Metabolites

245 records
Metabolite IDMetabolite nameStructureCAS number
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017265Uridine diphosphate-N-acetylglucosamineC17H27N3O17P2Chemical structure of Uridine diphosphate-N-acetylglucosamine528-04-1
Average607.3537Da
Monoisotopic607.081569477Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da

Displaying 161–170 of 245 metabolites