Gluconobacter oxydans

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Acetobacterales

Family

Acetobacteraceae

Genus

Gluconobacter

Description

Gluconobacter oxydans is a gram-negative, rod-shaped bacterium that belongs to the family Acetobacteraceae. It has a temperature preference category of Mesophilic, meaning it thrives in moderate temperatures ranging from 20°C to 40°C. As a chemoheterotroph, it derives its energy and organic compounds from the degradation of organic matter in its environment. Gluconobacter oxydans is capable of aerobic respiration, using oxygen as its primary energy source. This is evident in its oxygen preference, classified as an Obligate Aerobe, which means it requires oxygen to survive and grow. In terms of its metabolic properties, G. oxydans is a heterotroph, meaning it cannot produce its own food through photosynthesis or chemosynthesis. Instead, it relies on the breakdown and consumption of organic compounds. Despite this, it is capable of oxidizing carbohydrates, such as glucose, to produce gluconic acid, a key compound in various industrial applications. The bacterium's cell walls are typically Gram-negative, characterized by an outer membrane and a thin peptidoglycan layer. Its rod-shaped morphology allows it to adapt to a variety of environments, from soil to aquatic ecosystems. In terms of its distribution, Gluconobacter oxydans has been isolated from diverse environments, including soil, plants, and water. Its ability to thrive in a range of settings is likely due to its adaptability and ability to exploit a variety of organic matter sources. Gluconobacter oxydans is a significant microbe in the production of gluconic acid, which is used in various applications, including food preservation, pharmaceuticals, and biotechnology. Its ability to produce this valuable compound has led to extensive research into its metabolic pathways and potential industrial applications. As a result, G. oxydans has become a model organism for understanding the mechanisms of bacterial metabolism and developing novel biotechnological strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderAcetobacterales
FamilyAcetobacteraceae
GenusGluconobacter
SpeciesGluconobacter oxydans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Gluconobacter oxydans
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gluconobacter oxydans

Accession NumberLHZG00000000.1

Gene Summary

Adenine Count

548241 bp

Thymine Count

551029 bp

Guanine Count

862293 bp

Cytosine Count

857689 bp

Genome Length

2819252 bp

Protein-coding Genes

2539 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinAD950_13690Not Available+2947305 - 294765213518.1
acyl-peptide hydrolaseAD950_13695Not Available-2947711 - 294963369125.9
hypothetical proteinAD950_13700Not Available+2949742 - 295038323264.0
oxidoreductaseAD950_13705Not Available+2950407 - 295137834267.4
hypothetical proteinAD950_13710Not Available-2951496 - 295194216952.2
phosphataseAD950_13715Not Available-2951939 - 295264325581.7
uroporphyrinogen decarboxylaseAD950_13720Not Available-2952652 - 295371338907.5
septum formation protein mafAD950_13725Not Available+2954067 - 295467821956.5
Trna-alaNot AvailableNot Available+2954769 - 2954844Not Available
hypothetical proteinAD950_13735Not Available+2954983 - 295612541938.6

Displaying genes 5261 – 5270 of 5305 in total

Pathways

23 pathways

Metabolites

245 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000491D-erythruloseC4H8O4Chemical structure of D-erythruloseNot available
Average120.104Da
Monoisotopic120.0422587Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da

Displaying 1–10 of 245 metabolites