Rhizobium sp.

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. is a Gram-negative, nonsporulating bacterium that thrives in aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is commonly found in the rhizosphere, particularly in Borj Cedria soil, where it plays a crucial role in soil health and plant growth. Rhizobium species are well-known for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation that enhances soil nitrogen availability, thereby promoting plant development. The presence of Rhizobium sp. in the rhizosphere underscores its importance in agricultural ecosystems, as it contributes to the sustainability of crop production through the enhancement of nitrogen content in the soil. This characteristic is particularly vital in natural and managed ecosystems, where nitrogen limitation can hinder plant growth. The ability of Rhizobium sp. to adapt to specific soil environments, such as those found in Borj Cedria, illustrates its potential for application in sustainable agricultural practices, particularly in areas where nitrogen fertilizers are not feasible or environmentally desirable. Thus, Rhizobium sp. serves as a model organism for studying plant-microbe interactions and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature28
Temperature rangeNot Available
HabitatBorj cedria soil; rhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp.

Accession NumberPEKW00000000.1

Gene Summary

Adenine Count

853205 bp

Thymine Count

848417 bp

Guanine Count

1522197 bp

Cytosine Count

1543091 bp

Genome Length

4767797 bp

Protein-coding Genes

4539 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinCTR54_19085Not Available+3917742 - 39179758111.2
3-isopropylmalate dehydratase small subunitCTR54_19090Not Available+3918114 - 391871921996.2
3-isopropylmalate dehydrogenaseCTR54_19095Not Available+3918880 - 391999239573.8
phosphataseCTR54_19100Not Available+3920117 - 392086327609.2
rna polymerase factor sigma-32CTR54_19105Not Available+3921101 - 392197933025.4
metalloproteaseCTR54_19110Not Available-3922019 - 392353654440.7
thiamine abc transporter atp-binding proteinCTR54_19115Not Available-3923812 - 392454325805.1
thiamine/thiamine pyrophosphate abc transporter, permease proteinCTR54_19120Not Available-3924533 - 392617957610.3
thiamine abc transporter substrate binding subunitCTR54_19125Not Available-3926182 - 392720737153.5
glycosyl transferase family 1CTR54_19130Not Available+3927596 - 392938365661.8

Displaying genes 3791 – 3800 of 4602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites