Rhizobium sp.

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. is a Gram-negative, nonsporulating bacterium that thrives in aerobic conditions, with an optimal growth temperature of 28.0°C. This microbe is commonly found in the rhizosphere, particularly in Borj Cedria soil, where it plays a crucial role in soil health and plant growth. Rhizobium species are well-known for their symbiotic relationships with leguminous plants, facilitating nitrogen fixation that enhances soil nitrogen availability, thereby promoting plant development. The presence of Rhizobium sp. in the rhizosphere underscores its importance in agricultural ecosystems, as it contributes to the sustainability of crop production through the enhancement of nitrogen content in the soil. This characteristic is particularly vital in natural and managed ecosystems, where nitrogen limitation can hinder plant growth. The ability of Rhizobium sp. to adapt to specific soil environments, such as those found in Borj Cedria, illustrates its potential for application in sustainable agricultural practices, particularly in areas where nitrogen fertilizers are not feasible or environmentally desirable. Thus, Rhizobium sp. serves as a model organism for studying plant-microbe interactions and sustainable agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature28
Temperature rangeNot Available
HabitatBorj cedria soil; rhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp.

Accession NumberPEKW00000000.1

Gene Summary

Adenine Count

853205 bp

Thymine Count

848417 bp

Guanine Count

1522197 bp

Cytosine Count

1543091 bp

Genome Length

4767797 bp

Protein-coding Genes

4539 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tetr family transcriptional regulatorCTR54_16650Not Available+3402013 - 340261222574.1
phenylacetic acid degradation bifunctional protein paazCTR54_16655Not Available-3402698 - 340476173183.4
phenylacetic acid degradation proteinCTR54_16660Not Available-3404832 - 340590839492.2
phenylacetate-coa oxygenase subunit paajCTR54_16665Not Available-3405929 - 340645019014.7
phenylacetate-coa oxygenase subunit paaiCTR54_16670Not Available-3406461 - 340723728451.9
1,2-phenylacetyl-coa epoxidase subunit bCTR54_16675Not Available-3407237 - 340752110668.6
1,2-phenylacetyl-coa epoxidase subunit aCTR54_16680Not Available-3407585 - 340858337852.9
3-oxoadipyl-coa thiolaseCTR54_16685Not Available-3408601 - 340980641633.3
paax family transcriptional regulatorCTR54_16690Not Available-3409979 - 341085431575.1
d-tagatose-bisphosphate aldolase, class ii, non-catalytic subunitCTR54_16695Not Available-3411142 - 341242245794.8

Displaying genes 3311 – 3320 of 4602 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites