Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DCW88_24970 | Not Available | - | 4494506 - 4495040 | 18540.4 |
| amino acid abc transporter permease | DCW88_24975 | Not Available | - | 4495083 - 4495733 | 22988.7 |
| amino acid abc transporter permease | DCW88_24980 | Not Available | - | 4495746 - 4496414 | 24137.3 |
| 3-carboxy-cis,cis-muconate cycloisomerase | DCW88_24985 | Not Available | - | 4496756 - 4497844 | 38538.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | DCW88_24990 | Not Available | - | 4497913 - 4498533 | 22891.0 |
| protocatechuate 3,4-dioxygenase subunit beta | DCW88_24995 | Not Available | - | 4498536 - 4499276 | 27797.4 |
| 4-carboxymuconolactone decarboxylase | DCW88_25000 | Not Available | - | 4499273 - 4499707 | 15717.5 |
| 3-oxoadipate enol-lactonase | DCW88_25005 | Not Available | - | 4499711 - 4500508 | 28433.2 |
| pca operon transcription factor pcaq | DCW88_25010 | Not Available | + | 4500602 - 4501543 | 33762.1 |
| glycogen debranching enzyme glgx | DCW88_25015 | Not Available | - | 4501601 - 4502454 | 32020.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
