Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | DCW88_24510 | Not Available | + | 4410997 - 4412019 | 36620.0 |
| 2-hydroxyacid dehydrogenase | DCW88_24515 | Not Available | + | 4412359 - 4413321 | 34097.2 |
| myo-inositol 2-dehydrogenase | DCW88_24520 | Not Available | - | 4413559 - 4414686 | 41304.3 |
| 5-deoxy-glucuronate isomerase | DCW88_24525 | Not Available | - | 4414838 - 4415650 | 29960.1 |
| myo-inosose-2 dehydratase | DCW88_24530 | Not Available | - | 4416032 - 4416919 | 31958.9 |
| nad(p)/fad-dependent oxidoreductase | DCW88_24535 | Not Available | + | 4416920 - 4418088 | 43670.2 |
| n-acetyltransferase | DCW88_24540 | Not Available | + | 4418335 - 4418787 | 16848.7 |
| hypothetical protein | DCW88_24545 | Not Available | - | 4418859 - 4419236 | 13830.5 |
| 3-oxoadipyl-coa thiolase | DCW88_24550 | Not Available | - | 4419469 - 4419985 | 17499.5 |
| excinuclease abc subunit a | DCW88_24555 | Not Available | - | 4419986 - 4421987 | 72850.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
