Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan editing factor pgef | DCW88_23215 | Not Available | - | 4175596 - 4176390 | 28823.9 |
| tetr family transcriptional regulator | DCW88_23220 | Not Available | - | 4176542 - 4176718 | 5930.26 |
| anhydro-n-acetylmuramic acid kinase | DCW88_23225 | Not Available | - | 4176755 - 4177876 | 39267.1 |
| tyrosine--trna ligase | DCW88_23230 | Not Available | + | 4178026 - 4179254 | 45170.9 |
| abc transporter substrate-binding protein | DCW88_23235 | Not Available | + | 4179255 - 4180309 | 38722.9 |
| glycerol-3-phosphate transporter permease | DCW88_23240 | Not Available | + | 4180479 - 4181360 | 32767.6 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | DCW88_23245 | Not Available | + | 4181372 - 4182214 | 31367.4 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DCW88_23250 | Not Available | + | 4182225 - 4182835 | 22799.7 |
| peroxidase | DCW88_23255 | Not Available | + | 4183071 - 4183727 | 23904.4 |
| hypothetical protein | DCW88_23260 | Not Available | - | 4183778 - 4184230 | 16941.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
