Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DCW88_23365 | Not Available | - | 4200069 - 4200950 | 32580.0 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | DCW88_23370 | Not Available | + | 4201056 - 4202391 | 47511.4 |
| dutp diphosphatase | DCW88_23375 | Not Available | - | 4202406 - 4202876 | 16306.7 |
| peptide chain release factor 3 | DCW88_23380 | Not Available | + | 4202967 - 4204550 | 58896.8 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DCW88_23385 | Not Available | + | 4204722 - 4205927 | 42479.6 |
| mmcq/yjbr family dna-binding protein | DCW88_23390 | Not Available | + | 4205924 - 4206298 | 14233.1 |
| sterol desaturase family protein | DCW88_23395 | Not Available | - | 4206307 - 4207221 | 34043.5 |
| 2-polyprenylphenol 6-hydroxylase | DCW88_23400 | Not Available | - | 4207383 - 4208957 | 58287.1 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DCW88_23405 | Not Available | - | 4208994 - 4209770 | 28681.3 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | DCW88_23410 | Not Available | + | 4209914 - 4210810 | 32871.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
