Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | DCW88_22580 | Not Available | + | 4061711 - 4062544 | 30282.8 |
| mfs transporter | DCW88_22585 | Not Available | - | 4062592 - 4063303 | 25307.1 |
| mfs transporter | DCW88_22590 | Not Available | - | 4063461 - 4064044 | 21872.3 |
| hypothetical protein | DCW88_22595 | Not Available | + | 4064260 - 4064394 | 4909.17 |
| 3-isopropylmalate dehydratase large subunit | DCW88_22600 | Not Available | + | 4064458 - 4065867 | 51068.8 |
| hypothetical protein | DCW88_22610 | Not Available | - | 4067561 - 4067737 | 6920.62 |
| thiamine abc transporter atp-binding protein | DCW88_22615 | Not Available | - | 4067787 - 4068503 | 25699.0 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | DCW88_22620 | Not Available | - | 4068500 - 4070140 | 58399.6 |
| thiamine abc transporter substrate binding subunit | DCW88_22625 | Not Available | - | 4070160 - 4071173 | 36929.4 |
| glyoxalase | DCW88_22630 | Not Available | - | 4071367 - 4071759 | 14845.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
