Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna 2',3'-cyclic phosphodiesterase | DCW88_21480 | Not Available | + | 3883635 - 3884228 | 21945.5 |
| low molecular weight phosphotyrosine protein phosphatase | DCW88_21485 | Not Available | - | 3884162 - 3884641 | 17689.2 |
| 4a-hydroxytetrahydrobiopterin dehydratase | DCW88_21490 | Not Available | + | 3884700 - 3885005 | 11333.4 |
| duf1232 domain-containing protein | DCW88_21495 | Not Available | + | 3885057 - 3885437 | 14147.3 |
| hypothetical protein | DCW88_21500 | Not Available | + | 3885734 - 3886237 | 17715.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DCW88_21505 | Not Available | + | 3886504 - 3887676 | 43560.9 |
| abc transporter permease | DCW88_21510 | Not Available | + | 3887785 - 3888738 | 32412.0 |
| abc transporter permease | DCW88_21515 | Not Available | + | 3888846 - 3889727 | 30184.9 |
| abc transporter atp-binding protein | DCW88_21520 | Not Available | + | 3889724 - 3890518 | 28430.7 |
| lyse family translocator | DCW88_21525 | Not Available | - | 3890557 - 3891204 | 23162.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
