Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | DCW88_21430 | Not Available | + | 3877348 - 3877780 | 15616.8 |
| phosphopyruvate hydratase | DCW88_21435 | Not Available | - | 3877781 - 3878148 | 12644.0 |
| 3-deoxy-8-phosphooctulonate synthase | DCW88_21440 | Not Available | - | 3878286 - 3879131 | 29958.2 |
| voc family protein | DCW88_21445 | Not Available | - | 3879128 - 3880009 | 30953.6 |
| repressor lexa | DCW88_21450 | Not Available | + | 3880324 - 3880814 | 17637.5 |
| repressor lexa | DCW88_21455 | Not Available | + | 3881003 - 3881172 | 5898.98 |
| repressor lexa | DCW88_21460 | Not Available | + | 3881352 - 3881439 | 3298.06 |
| glutathione s-transferase family protein | DCW88_21465 | Not Available | + | 3881692 - 3882369 | 24876.4 |
| hypothetical protein | DCW88_21470 | Not Available | - | 3882389 - 3882787 | 14649.5 |
| arylesterase | DCW88_21475 | Not Available | + | 3882916 - 3883566 | 23097.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
