Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cellulose synthase | DCW88_20850 | Not Available | - | 3771202 - 3773436 | 80879.7 |
| endoglucanase | DCW88_20855 | Not Available | - | 3773520 - 3774575 | 37393.6 |
| cellulose synthase bcsb subunit | DCW88_20860 | Not Available | - | 3774572 - 3776047 | 52537.2 |
| histidine kinase | DCW88_20865 | Not Available | + | 3776048 - 3776316 | 9476.21 |
| hypothetical protein | DCW88_20870 | Not Available | + | 3776421 - 3776849 | 14883.5 |
| c-type cytochrome biogenesis protein ccmi | DCW88_20875 | Not Available | + | 3777001 - 3778173 | 42054.6 |
| cytochrome c maturation protein ccme | DCW88_20880 | Not Available | + | 3778170 - 3778682 | 17970.6 |
| heme lyase nrfefg subunit nrfe | DCW88_20885 | Not Available | + | 3778679 - 3779409 | 27130.4 |
| homospermidine synthase | DCW88_20890 | Not Available | - | 3779683 - 3781128 | 53704.8 |
| ggdef domain-containing protein | DCW88_20895 | Not Available | + | 3781381 - 3782289 | 34515.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
