Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DCW88_20520 | Not Available | - | 3711224 - 3711639 | 15211.9 |
| hypothetical protein | DCW88_20525 | Not Available | - | 3711645 - 3712178 | 19375.4 |
| allantoinase | DCW88_20530 | Not Available | - | 3712171 - 3713088 | 34850.9 |
| hypothetical protein | DCW88_20535 | Not Available | - | 3713201 - 3714130 | 35542.0 |
| branched-chain amino acid abc transporter permease | DCW88_20545 | Not Available | - | 3716039 - 3716236 | 7450.29 |
| branched-chain amino acid abc transporter permease | DCW88_20550 | Not Available | - | 3716406 - 3716885 | 17098.5 |
| abc transporter atp-binding protein | DCW88_20565 | Not Available | - | 3718630 - 3719415 | 28137.3 |
| abc transporter permease | DCW88_20570 | Not Available | - | 3719445 - 3720653 | 42935.8 |
| lysr family transcriptional regulator | DCW88_20575 | Not Available | + | 3720866 - 3721783 | 34640.9 |
| llm class flavin-dependent oxidoreductase | DCW88_20580 | Not Available | + | 3721917 - 3722594 | 24966.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
