Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | DCW88_20230 | Not Available | + | 3655433 - 3659107 | 131016.0 |
| Trna-glu | Not Available | Not Available | + | 3659234 - 3659308 | Not Available |
| Trna-glu | Not Available | Not Available | + | 3659756 - 3659830 | Not Available |
| hypothetical protein | DCW88_20250 | Not Available | - | 3661901 - 3662125 | 8311.93 |
| homoserine dehydrogenase | DCW88_20255 | Not Available | - | 3662313 - 3663623 | 46413.0 |
| aminotransferase | DCW88_20260 | Not Available | - | 3663685 - 3663853 | 6148.32 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DCW88_20265 | Not Available | + | 3663854 - 3666926 | 109286.0 |
| exopolyphosphatase | DCW88_20275 | Not Available | + | 3668173 - 3669696 | 55524.7 |
| acetyltransferase | DCW88_20280 | Not Available | - | 3669744 - 3670376 | 23125.7 |
| hypothetical protein | DCW88_20285 | Not Available | - | 3670554 - 3670871 | 11579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
