Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease | DCW88_01105 | Not Available | - | 205715 - 206506 | 28630.2 |
| abc transporter permease | DCW88_01110 | Not Available | - | 206516 - 207499 | 35847.8 |
| spermidine/putrescine abc transporter substrate-binding protein | DCW88_01115 | Not Available | - | 207580 - 208680 | 40264.8 |
| lysr family transcriptional regulator | DCW88_01120 | Not Available | - | 208734 - 209714 | 34635.9 |
| nad/nadp octopine/nopaline dehydrogenase | DCW88_01125 | Not Available | + | 210102 - 210750 | 22842.7 |
| nad/nadp octopine/nopaline dehydrogenase | DCW88_01130 | Not Available | + | 210937 - 211361 | 15355.3 |
| diguanylate cyclase | DCW88_01140 | Not Available | - | 211605 - 212149 | 19356.2 |
| diguanylate cyclase | DCW88_01145 | Not Available | - | 212308 - 213543 | 45555.3 |
| sigma-54-dependent fis family transcriptional regulator | DCW88_01150 | Not Available | + | 213861 - 214190 | 12655.0 |
| protein ndvb | DCW88_01155 | Not Available | + | 214191 - 222606 | 313806.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
