Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | DCW88_09705 | Not Available | - | 1756367 - 1756912 | 20220.3 |
| hypothetical protein | DCW88_09710 | Not Available | + | 1757104 - 1757384 | 9645.8 |
| hypothetical protein | DCW88_09715 | Not Available | + | 1757511 - 1758029 | 18460.0 |
| hypothetical protein | DCW88_09725 | Not Available | + | 1758754 - 1758948 | 7300.65 |
| l-idonate 5-dehydrogenase | DCW88_09740 | Not Available | - | 1760405 - 1761421 | 35879.6 |
| gluconate 5-dehydrogenase | DCW88_09745 | Not Available | + | 1761636 - 1762391 | 26232.3 |
| 6-phosphogluconate dehydrogenase | DCW88_09750 | Not Available | + | 1762477 - 1763370 | 30820.0 |
| aldose epimerase | DCW88_09755 | Not Available | + | 1763520 - 1763728 | 7005.14 |
| p-type dna transfer atpase virb11 | DCW88_09760 | Not Available | + | 1763729 - 1764041 | 11671.8 |
| conjugal transfer protein trag | DCW88_09765 | Not Available | + | 1764010 - 1766808 | 103320.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
