Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | DCW88_09545 | Not Available | - | 1724797 - 1726227 | 53116.0 |
| hypothetical protein | DCW88_09550 | Not Available | - | 1726224 - 1726448 | 8238.39 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | DCW88_09555 | Not Available | - | 1726505 - 1727236 | 25576.1 |
| abc transporter | DCW88_09560 | Not Available | + | 1727237 - 1728130 | 31933.8 |
| abc transporter | DCW88_09565 | Not Available | + | 1728270 - 1728822 | 19317.2 |
| abc transporter permease | DCW88_09570 | Not Available | + | 1728812 - 1729903 | 39200.0 |
| abc transporter permease | DCW88_09575 | Not Available | + | 1729900 - 1730823 | 32153.4 |
| bmp family abc transporter substrate-binding protein | DCW88_09580 | Not Available | + | 1730859 - 1731932 | 38819.3 |
| fadr family transcriptional regulator | DCW88_09585 | Not Available | + | 1732231 - 1732968 | 27431.1 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | DCW88_09590 | Not Available | + | 1733296 - 1734657 | 47775.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
