Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gluconolaconase | DCW88_09155 | Not Available | - | 1653119 - 1654006 | 31790.6 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | DCW88_09160 | Not Available | - | 1654011 - 1654640 | 21387.2 |
| 2-dehydro-3-deoxygalactonokinase | DCW88_09165 | Not Available | - | 1654656 - 1655570 | 32243.6 |
| sdr family nad(p)-dependent oxidoreductase | DCW88_09170 | Not Available | - | 1655570 - 1656343 | 27132.9 |
| iclr family transcriptional regulator | DCW88_09175 | Not Available | + | 1656454 - 1657293 | 30094.2 |
| luxr family transcriptional regulator | DCW88_09180 | Not Available | + | 1657502 - 1658242 | 28141.9 |
| abc transporter permease | DCW88_09185 | Not Available | + | 1658321 - 1659544 | 43428.3 |
| sodium:proton antiporter | DCW88_09190 | Not Available | + | 1659672 - 1660046 | 12617.2 |
| alkylhydroperoxidase | DCW88_09195 | Not Available | - | 1660047 - 1660500 | 16902.3 |
| rrf2 family transcriptional regulator | DCW88_09200 | Not Available | - | 1660608 - 1661111 | 17428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
