Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkane 1-monooxygenase | DCW88_08530 | Not Available | - | 1535488 - 1536489 | 35980.4 |
| rrf2 family transcriptional regulator | DCW88_08535 | Not Available | + | 1536795 - 1537244 | 16208.7 |
| acyl-coa dehydrogenase | DCW88_08540 | Not Available | - | 1537275 - 1538219 | 33067.6 |
| flavin reductase | DCW88_08545 | Not Available | - | 1538268 - 1538813 | 19075.7 |
| alkanesulfonate monooxygenase | DCW88_08550 | Not Available | - | 1538994 - 1539146 | 5242.19 |
| holliday junction branch migration dna helicase ruvb | DCW88_08555 | Not Available | - | 1539147 - 1539368 | 8023.55 |
| holliday junction branch migration protein ruva | DCW88_08560 | Not Available | - | 1539491 - 1540108 | 21360.8 |
| crossover junction endodeoxyribonuclease ruvc | DCW88_08565 | Not Available | - | 1540138 - 1540650 | 18167.2 |
| llm class flavin-dependent oxidoreductase | DCW88_08570 | Not Available | + | 1540874 - 1541875 | 36560.9 |
| yebc/pmpr family dna-binding transcriptional regulator | DCW88_08575 | Not Available | - | 1541931 - 1542647 | 25747.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
