Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal kinase pdxy | DCW88_08110 | Not Available | + | 1453018 - 1453893 | 31606.5 |
| carbonic anhydrase | DCW88_08115 | Not Available | + | 1454068 - 1454709 | 23562.1 |
| lytic transglycosylase | DCW88_08120 | Not Available | - | 1454887 - 1455702 | 28738.2 |
| aspartate-semialdehyde dehydrogenase | DCW88_08125 | Not Available | - | 1455924 - 1456958 | 37553.9 |
| mfs transporter | DCW88_08135 | Not Available | + | 1457509 - 1458063 | 20099.8 |
| alanine racemase | DCW88_08140 | Not Available | - | 1458064 - 1458899 | 30308.5 |
| arac family transcriptional regulator | DCW88_08145 | Not Available | + | 1459022 - 1459843 | 30300.0 |
| branched-chain amino acid abc transporter permease | DCW88_08150 | Not Available | + | 1459934 - 1460638 | 24619.5 |
| s9 family peptidase | DCW88_08155 | Not Available | - | 1460723 - 1462573 | 68862.4 |
| duf930 domain-containing protein | DCW88_08160 | Not Available | + | 1462797 - 1463198 | 15172.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
