Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DCW88_07205 | Not Available | + | 1287884 - 1289776 | 68804.7 |
| abc transporter substrate-binding protein | DCW88_07210 | Not Available | + | 1289773 - 1291674 | 72193.2 |
| abc transporter permease | DCW88_07215 | Not Available | + | 1291676 - 1292327 | 24819.0 |
| abc transporter permease | DCW88_07220 | Not Available | + | 1292442 - 1292807 | 13248.7 |
| hypothetical protein | DCW88_07230 | Not Available | + | 1294111 - 1295319 | 44805.9 |
| colanic acid biosynthesis glycosyltransferase wcal | DCW88_07235 | Not Available | + | 1295481 - 1296608 | 41916.9 |
| glycosyl transferase | DCW88_07240 | Not Available | + | 1296605 - 1297756 | 41101.6 |
| copper homeostasis protein cutc | DCW88_07245 | Not Available | - | 1297722 - 1298462 | 25637.8 |
| mfs transporter | DCW88_07250 | Not Available | - | 1298488 - 1299693 | 41980.8 |
| gntr family transcriptional regulator | DCW88_07260 | Not Available | - | 1300660 - 1301364 | 26002.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
