Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DCW88_07000 | Not Available | - | 1250067 - 1250684 | 22996.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DCW88_07005 | Not Available | - | 1250696 - 1252579 | 68594.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DCW88_07010 | Not Available | - | 1252636 - 1253961 | 48166.5 |
| nad(p)-dependent dehydrogenase | DCW88_07015 | Not Available | + | 1253985 - 1254239 | 8694.35 |
| hypothetical protein | DCW88_07020 | Not Available | + | 1254281 - 1254568 | 10649.6 |
| ku protein | DCW88_07025 | Not Available | + | 1254565 - 1255392 | 31233.8 |
| dna ligase | DCW88_07030 | Not Available | + | 1255499 - 1256198 | 25980.2 |
| dna ligase | DCW88_07035 | Not Available | + | 1256328 - 1256532 | 7093.27 |
| ku protein | DCW88_07040 | Not Available | - | 1256542 - 1257333 | 29710.0 |
| duf47 domain-containing protein | DCW88_07050 | Not Available | - | 1258424 - 1259068 | 24175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
