Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hicb family antitoxin | DCW88_06640 | Not Available | - | 1191660 - 1191992 | 12051.3 |
| type ii toxin-antitoxin system hica family toxin | DCW88_06645 | Not Available | - | 1191989 - 1192243 | 9476.42 |
| hypothetical protein | DCW88_06650 | Not Available | - | 1192257 - 1192475 | 8231.47 |
| alpa family phage regulatory protein | DCW88_06655 | Not Available | - | 1192564 - 1192791 | 8857.42 |
| ti-type conjugative transfer relaxase traa | DCW88_06660 | Not Available | - | 1192929 - 1195883 | 110022.0 |
| conjugal transfer protein trad | DCW88_06665 | Not Available | + | 1196043 - 1196381 | 11696.8 |
| conjugal transfer protein trad | DCW88_06670 | Not Available | + | 1196383 - 1196655 | 10140.2 |
| histidine kinase | DCW88_06675 | Not Available | - | 1196891 - 1198255 | 49264.1 |
| dna-binding response regulator | DCW88_06680 | Not Available | - | 1198255 - 1198971 | 26935.6 |
| sterol desaturase family protein | DCW88_06690 | Not Available | + | 1199695 - 1200228 | 19539.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
