Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | DCW88_05610 | Not Available | - | 1014321 - 1015043 | 26286.3 |
| amino acid abc transporter permease | DCW88_05615 | Not Available | - | 1015036 - 1015689 | 23866.9 |
| amino acid abc transporter permease | DCW88_05620 | Not Available | - | 1015702 - 1016367 | 24290.3 |
| amino acid abc transporter substrate-binding protein | DCW88_05625 | Not Available | - | 1016437 - 1017243 | 28792.3 |
| integrase | DCW88_05630 | Not Available | - | 1017429 - 1017542 | 4060.82 |
| error-prone dna polymerase | DCW88_05635 | Not Available | + | 1017552 - 1018996 | 53226.3 |
| hypothetical protein | DCW88_05640 | Not Available | + | 1019443 - 1019721 | 10703.8 |
| hrp-dependent type iii effector protein | DCW88_05650 | Not Available | + | 1020353 - 1021393 | 35720.3 |
| fadr family transcriptional regulator | DCW88_05655 | Not Available | + | 1021398 - 1022105 | 26470.7 |
| alcohol dehydrogenase | DCW88_05660 | Not Available | - | 1022162 - 1023289 | 39297.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
