Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | DCW88_05560 | Not Available | - | 1006757 - 1007734 | 35975.4 |
| ureidoglycolate lyase | DCW88_05565 | Not Available | + | 1007878 - 1008346 | 17281.4 |
| hydroxyisourate hydrolase | DCW88_05570 | Not Available | + | 1008343 - 1008699 | 12801.2 |
| metallophosphoesterase | DCW88_05575 | Not Available | + | 1008705 - 1009448 | 27455.7 |
| peptidase m15 | DCW88_05580 | Not Available | - | 1009452 - 1010747 | 46198.6 |
| tetr/acrr family transcriptional regulator | DCW88_05585 | Not Available | + | 1010913 - 1011491 | 21029.1 |
| qace family quaternary ammonium compound efflux smr transporter | DCW88_05590 | Not Available | + | 1011494 - 1011838 | 12185.3 |
| l-lactate dehydrogenase | DCW88_05595 | Not Available | - | 1012159 - 1012843 | 24808.1 |
| amino acid dehydrogenase | DCW88_05600 | Not Available | - | 1012959 - 1013970 | 36465.9 |
| amino acid dehydrogenase | DCW88_05605 | Not Available | - | 1014073 - 1014321 | 8161.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
