Agrobacterium sp.

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdry sugarcane straw; rhizosphere soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium sp.

Accession NumberDMZS00000000.1

Gene Summary

Adenine Count

980049 bp

Thymine Count

982281 bp

Guanine Count

1430890 bp

Cytosine Count

1425960 bp

Genome Length

4874709 bp

Protein-coding Genes

4976 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
mbl fold metallo-hydrolaseDCW88_05510Not Available+995797 - 99665731805.7
di-trans,poly-cis-decaprenylcistransferaseDCW88_05515Not Available-996949 - 99785333721.7
polygalacturonaseDCW88_05520Not Available-997862 - 99941555342.7
carbohydrate abc transporter substrate-binding proteinDCW88_05525Not Available-999530 - 100079845820.4
sugar abc transporter atp-binding proteinDCW88_05530Not Available-1000842 - 100194239696.5
carbohydrate abc transporter permeaseDCW88_05535Not Available-1001945 - 100282932836.6
sugar abc transporter permeaseDCW88_05540Not Available-1002834 - 100371533123.0
arac family transcriptional regulatorDCW88_05545Not Available+1003928 - 100485435154.2
trap transporter large permeaseDCW88_05550Not Available-1004884 - 100616444975.1
trap transporter small permeaseDCW88_05555Not Available-1006165 - 100668618901.5

Displaying genes 1111 – 1120 of 5138 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites