Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5,6-dimethylbenzimidazole synthase | DCW88_05350 | Not Available | + | 962714 - 963080 | 13697.2 |
| abc transporter | DCW88_05355 | Not Available | - | 963081 - 963282 | 6923.58 |
| mce family protein | DCW88_05360 | Not Available | - | 963298 - 964668 | 48071.7 |
| abc transporter atp-binding protein | DCW88_05365 | Not Available | - | 964677 - 965516 | 30890.4 |
| mlae family lipid abc transporter permease subunit | DCW88_05370 | Not Available | - | 965527 - 966687 | 40747.3 |
| dipeptide epimerase | DCW88_05375 | Not Available | + | 966831 - 967814 | 35150.0 |
| udp-2,3-diacylglucosamine diphosphatase | DCW88_05380 | Not Available | - | 968112 - 968942 | 31287.4 |
| nadp-dependent malic enzyme | DCW88_05385 | Not Available | + | 969181 - 971496 | 83090.3 |
| duf2865 domain-containing protein | DCW88_05390 | Not Available | + | 971662 - 972732 | 38574.3 |
| zn-dependent hydrolase | DCW88_05400 | Not Available | - | 973029 - 974258 | 44282.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
