Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DCW88_04990 | Not Available | + | 905246 - 906046 | 28310.9 |
| peptide abc transporter atp-binding protein | DCW88_04995 | Not Available | + | 906043 - 906822 | 27972.1 |
| aspartate aminotransferase | DCW88_05000 | Not Available | + | 906832 - 907950 | 38598.0 |
| hypothetical protein | DCW88_05005 | Not Available | - | 908082 - 908324 | 9098.09 |
| arac family transcriptional regulator | DCW88_05010 | Not Available | + | 908370 - 908858 | 18450.1 |
| voc family protein | DCW88_05015 | Not Available | + | 908873 - 909277 | 15088.8 |
| hypothetical protein | DCW88_05020 | Not Available | + | 909306 - 909542 | 8785.2 |
| dihydroxy-acid dehydratase | DCW88_05025 | Not Available | - | 909707 - 910883 | 42417.5 |
| sugar kinase | DCW88_05030 | Not Available | + | 910884 - 911534 | 22176.5 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DCW88_05040 | Not Available | - | 912589 - 912882 | 10780.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
