Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium sp. |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | dry sugarcane straw; rhizosphere soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium sp.
Accession NumberDMZS00000000.1
Gene Summary
Adenine Count
980049 bp
Thymine Count
982281 bp
Guanine Count
1430890 bp
Cytosine Count
1425960 bp
Genome Length
4874709 bp
Protein-coding Genes
4976 genes
Non-Coding Genes
162 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | DCW88_04930 | Not Available | - | 895550 - 896185 | 23812.0 |
| bola family transcriptional regulator | DCW88_04935 | Not Available | + | 896301 - 896582 | 10372.4 |
| 3-dehydroquinate synthase | DCW88_04940 | Not Available | - | 896809 - 897942 | 40089.2 |
| shikimate kinase | DCW88_04945 | Not Available | - | 897948 - 898529 | 21672.4 |
| hypothetical protein | DCW88_04950 | Not Available | - | 898526 - 898684 | 5574.76 |
| histidine kinase | DCW88_04955 | Not Available | + | 898718 - 898891 | 6336.03 |
| site-specific tyrosine recombinase xerd | DCW88_04960 | Not Available | + | 898888 - 899874 | 36139.4 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DCW88_04965 | Not Available | + | 899937 - 900890 | 34582.1 |
| abc transporter permease | DCW88_04980 | Not Available | + | 903433 - 904422 | 34959.8 |
| abc transporter permease | DCW88_04985 | Not Available | + | 904419 - 905249 | 28464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
