Agrobacterium rhizogenes str. ATCC 15834

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Martinezella

Description

Agrobacterium rhizogenes str. ATCC 15834 is a rod-shaped, Gram-negative bacterium that thrives in terrestrial habitats and exhibits an aerobic metabolism, requiring oxygen for growth. This strain is optimally active at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the Agrobacterium genus, A. rhizogenes is recognized for its role in plant interactions, particularly in the context of root development. While the specific pathogenicity of this strain has not been detailed, members of this group are known for their ability to transfer genetic material to plant cells, which can lead to the formation of root galls. This trait has significant implications for agricultural biotechnology, particularly in the genetic modification of plants. The ecological role of A. rhizogenes str. ATCC 15834 may extend beyond its interactions with plants, as its aerobic nature suggests a potential for involvement in soil nutrient cycling processes. By engaging in interactions with plant roots, this bacterium could contribute to the dynamics of microbial communities in terrestrial ecosystems, influencing plant health and soil fertility. Thus, while primarily recognized for its agricultural applications, A. rhizogenes str. ATCC 15834 may also play a critical role in broader ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusMartinezella
SpeciesMartinezella rhizogenes
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium rhizogenes str. ATCC 15834
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium rhizogenes str. ATCC 15834

Accession NumberJFZP00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6387 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chemotaxis protein cheyCN09_32540Not Available+6756380 - 675696721738.6
abc transporter substrate-binding proteinCN09_32545Not Available+6757017 - 675828845648.2
bicarbonate-binding proteinCN09_32550Not Available+6758654 - 675995246663.0
bicarbonate abc transporter permeaseCN09_32555Not Available+6760018 - 676091132317.2
nitrate abc transporter atp-binding proteinCN09_32560Not Available+6760922 - 676172229549.1
nitrite reductaseCN09_32565Not Available+6761727 - 676417788234.3
pp_06176CN09_32570Not Available+6764182 - 6764517Not Available
nitrate reductaseCN09_32575Not Available+6764529 - 676718695594.3
sf3a2-prov proteinCN09_32585Not Available+6767584 - 67678479353.7
hypothetical proteinCN09_32590Not Available-6767906 - 676873930134.8

Displaying genes 6231 – 6240 of 6486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites