Agrobacterium rhizogenes str. TPD7009

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Martinezella

Description

Agrobacterium rhizogenes str. TPD7009 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial environments and exhibits aerobic metabolic capabilities. This strain is optimally adapted to growth at a temperature of 25.0°C, which may reflect its natural habitat conditions. As a member of the Agrobacterium genus, it is known for its interactions with plant systems, particularly in relation to plant transformation and root development. The Gram-negative nature of A. rhizogenes str. TPD7009 indicates the presence of a thin peptidoglycan layer surrounded by an outer membrane, which is characteristic of this group of bacteria. The aerobic requirement suggests that oxygen is essential for its growth and metabolism, potentially influencing its ecological roles in soil environments where oxygen levels can vary. Given its terrestrial habitat, A. rhizogenes str. TPD7009 may play significant roles in soil ecology, including nutrient cycling and interactions with plant roots. Its unique ability to engage with plant systems could facilitate beneficial relationships that enhance plant health and growth, underscoring the importance of this strain in agricultural and ecological contexts. Further studies may reveal more about its specific interactions and contributions to terrestrial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusMartinezella
SpeciesMartinezella rhizogenes
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium rhizogenes str. TPD7009
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium rhizogenes str. TPD7009

Accession NumberQDFR00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4679 genes

Non-Coding Genes

102 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tigr00645 family proteinDC430_03830Not Available+789762 - 79028319223.1
luxr family transcriptional regulatorDC430_03835Not Available+790560 - 79127626845.7
duf2333 domain-containing proteinDC430_03840Not Available-791429 - 79262843996.8
hypothetical proteinDC430_03845Not Available-792734 - 79376538975.4
pseudoazurinDC430_03850Not Available-793965 - 79441415747.4
thymidine kinaseDC430_03855Not Available-794525 - 79510621613.9
choline abc transporter substrate-binding proteinDC430_03860Not Available+795399 - 79635834092.7
choline abc transporter permease subunitDC430_03865Not Available+796452 - 79730330588.9
choline abc transporter atp-binding proteinDC430_03870Not Available+797300 - 79834637912.1
transcriptional regulatorDC430_03875Not Available+798816 - 79913311215.5

Displaying genes 771 – 780 of 4781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites