Agrobacterium rhizogenes str. NCPPB2659

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Martinezella

Description

Agrobacterium rhizogenes str. NCPPB2659 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial environments and exhibits aerobic metabolic characteristics. This strain has an optimal growth temperature of 25.0 °C, which suggests it is well-adapted to moderate environmental conditions typically found in soil ecosystems. As a member of the Agrobacterium genus, A. rhizogenes is recognized for its role in plant interactions, particularly in the transformation of plant cells. While specific pathogenicity traits are not detailed in the available data, the general behavior of Agrobacterium species indicates their potential involvement in plant-associated processes. The aerobic nature of A. rhizogenes str. NCPPB2659 points to its reliance on oxygen for survival and growth, which may influence its ecological niche within soil microbiomes. This adaptation allows it to compete effectively with other microorganisms in well-oxygenated soil environments. The presence of this strain in terrestrial habitats highlights its potential contributions to soil health and plant development, possibly through mechanisms such as nutrient cycling or symbiotic relationships. Understanding the traits of A. rhizogenes str. NCPPB2659 could provide insights into its ecological roles and potential applications in agriculture and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusMartinezella
SpeciesMartinezella rhizogenes
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium rhizogenes str. NCPPB2659
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium rhizogenes str. NCPPB2659

Accession NumberNZ_CM004386.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2802 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
succinate dehydrogenase assembly factor 2A8L48_RS13795Not Available-2860669 - 286098011800.2
atp-dependent dna helicase recgA8L48_RS13800Not Available+2861170 - 286327576441.7
hypothetical proteinA8L48_RS13805Not Available+2863288 - 286356010254.3
type ii toxin-antitoxin system phd/yefm family antitoxinA8L48_RS13810Not Available+2863615 - 28638729129.78
type ii toxin-antitoxin system vapc family toxinA8L48_RS13815Not Available+2863869 - 286425213692.6
duf502 domain-containing proteinA8L48_RS13820Not Available-2864254 - 286492224554.6
gnat family n-acetyltransferaseA8L48_RS13825Not Available-2864936 - 286543917671.9
glutamine--fructose-6-phosphate transaminase (isomerizing)A8L48_RS13830Not Available-2865436 - 286726266129.6
bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmuA8L48_RS13835Not Available-2867467 - 286882847675.8
fadr/gntr family transcriptional regulatorA8L48_RS13840Not Available-2869038 - 286977527477.3

Displaying genes 2861 – 2870 of 3006 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites